Bait versus Bait
contact:jknight@lunenfeld.ca
User's Guide

Upload Data File  (Sample Input Files):
Saint File (-f)

Parameters:(default is suggested value)
FDR cutoff (-s)
normalization (-N)


   

Parameter descriptions
-f Saint Express file name. Use file output from Saint Express and do not modify. Should be tab deliminated text format. The first bait listed will be considered the "wild-type" and the second the "mutant".
-s FDR cutoff in range 0-1 (default 0.05)
-N Normalization. Options: 0 for no normalization (default), 1 for yes based on total spectral counts, 2 for normalization based on significant preys counts (see option -C)
Source code